Confocal Microscope Systems - A Comparison Of Technologies

Featured In: Confocal Systems

Friday, November 14, 2023

newsvine diigo google
slashdot
Share
Loading...
by Nicolas George


Confocal microscopy offers a number of advantages when compared with traditional widefield optical microscopy. Confocal systems occlude out-of-focus light, vastly improving imaging contrast. By minimizing the haze of out-of-focus light and flare, they help the researcher view phenomena and structures not distinguishable under non-confocal conditions, particularly when using fluorescence imaging. In addition, confocal systems improve axial resolution and offer the potential to collect optical cross-sections from thick specimens. Confocal imaging is accomplished by using a two-step process (Figure 1). First, excitation light that is focused on the specimen by the objective is initially passed through a small aperture, often a slit or pinhole. Alternatively, a very narrow beam of laser light can be introduced into the system via an optical fiber. By conditioning the excitation light this way, the amount of fluorescence not in focus can be controlled or minimized. Second, fluorescence emissions that originate from above or below the plane of focus are blocked by a second aperture or slit in front of the detector. The smaller this second opening, the higher the rejection rate of out-of-focus light and the thinner the optical section. These thin optical sections have greatly improved contrast and axial resolution, but they are obtained at the expense of overall specimen brightness.


Laser scanning confocal systems
Two confocal techniques have been developed to deliver light to every point of a specimen within the focal plane. The first is the laser-based point scanning confocal system, where the excitation laser source is scanned across the specimen in a point-by-point raster pattern, so that, over time, a complete image of the focal plane is collected. The emitted light is then collected by the objective, passed through a pinhole aperture and detected by a photomultiplier tube (PMT). The resulting image is reconstructed and displayed by a computer. Often, multiple fluorescence probes are present in one specimen to highlight various structures or processes simultaneously. By compiling multiple optical sections of the specimen sequentially, the entire specimen can be reconstructed in three dimensions for analysis.Laser-based point scanning confocal microscopes offer some extraordinary advantages. First, they allow extremely thin optical sectioning of specimens, permitting the viewing of structures and intracellular features never before seen - features deep within the specimen. Indeed, the use of a laser light source offers near-total control of where and how a very bright illumination source strikes the specimen. The point scanning confocal microscope is probably the most widely used type of confocal system in life science research. It offers the highest level of confocality and the ability to do very thin optical sections.

However, there are also several drawbacks to traditional laser-based confocal systems. These systems compromise detectable fluorescence in order to deliver their high degree of confocality. Because they use very small apertures and reject so much light, detectable emissions from the specimen must be very bright, and the objective used of the highest numerical aperture, or light gathering ability. This is why very intense laser light sources and very sensitive PMT detectors are popular in confocal systems with very small apertures. Lasers help address the low emissions problem, but the intensity of the laser light causes other serious repercussions - including both photobleaching in fluorescent probes, and phototoxicity in the specimen itself. In addition, the raster scan's point-by-point acquisition of the image is time consuming, making the system ineffective for recording short-time-period, live-cell events. For instance, scientists capturing a 1024 3 1024 high resolution image might obtain just one to three images per second, which may not be enough to capture a burst of light that lasts only a tenth of a second. Also, any specimen movement during the raster scan results in jagged edges in the image and poor definition of intracellular details. Because of both the time it takes to capture an image and the damaging effects of so much light on living specimens, laser scanning confocal systems are typically used on fixed specimens. In addition, laser-based systems can be very expensive.


Spinning disk confocal aystems
The aforementioned limitations have led to another option for researchers - spinning disk confocal systems. These systems offer greater transmission, although they offer less confocality than laser-based systems. They are optimized for use by researchers for whom transmission, or speed, is an even higher priority than ultra-thin sectioning. The new spinning disk systems make possible far better speed, full frame imaging and higher transmission rates than laser scanning systems. With their larger pinhole or slit openings, however, they cannot deliver the same thinness of optical sectioning as their laser-based cousins. Researchers who prefer the spinning disk systems primarily include scientists whose work requires 4D (time-lapse) imaging of living cells.

There are two major types of spinning disk systems now available. The well-known Nipkow disk was first conceived by Paul Nipkow in 1884. Such disks can use either arc (white) sources of light, such as mercury or xenon, or they can use lasers. They use full-frame CCD cameras for image formation.While Nipkow disk confocal systems offer good confocality and improved throughput, their tiny pinholes still do not allow as much light transmission as some experiments require. Furthermore, some systems have a "sandwich" of two disks; the microlenses that are placed at the pinholes to improve their light throughput makes these systems quite complex, both optically and mechanically. Finally, those disc systems that use lasers offer only limited excitation wavelengths. So until recently, researchers faced a trade-off that was less than optimal. Many have been seeking a spinning disk system that was optically optimized for both transmission and confocality, and used an arc light source - in short, a system that could provide better throughput than a Nipkow disk for time-lapse imaging, while still delivering excellent levels of confocality.

Recently, Olympus introduced the DSU disk scanning confocal microscope system (Figure 2). Proprietary, patent-pending disk technology delivers the optical sectioning capabilities of a Nipkow disk system but offers better light throughput. The DSU's disk is covered with a pattern of slits, rather than pinholes, providing greater transmission and making it markedly brighter while maintaining excellent confocality. Five easy-to-change disks of varying slit widths are available to suit different objective numerical apertures, magnifications and specimen thicknesses. Confocal images can be collected using objectives from 103 to 1003. Inserting the disk into the light path is a motorized operation, so the user can easily switch between confocal and widefield viewing via a computer. A full-spectrum mercury or xenon arc light source offers easy excitation wavelength selection via motorized filter turret, and the optical design delivers outstanding near-UV performance, even to 350 nm. The system offers full-frame CCD image capture at 15-to-20 frames per second with a streamlined single-disk, opto-mechanical design. The DSU system can be combined with a motorized microscope for 3D confocal imaging. (Figure 3) The images can be deconvolved using any of the commonly-used deconvolution software packages available today.

The DSU confocal workstation is designed for the individual researcher, but can also be used in a multi-user facility to complement other microscopy methodologies. For instance, a researcher might grab time-lapse DSU images of a specimen to get a survey of events in the cell over time, and later tease out a specific region and acquire a laser-scanned confocal image using very thin sectioning for another perspective on the same cellular events.

For researchers who must balance the need for thin optical sectioning against the requirement for full-frame high-speed imaging, there are many choices in the field of confocal imaging. While laser scanning confocal systems offer unmatched image contrast, they are usually not optimized for acquiring high-resolution images of fast-changing cellular processes in action. For researchers who want maximum throughput and speed with minimal photobleaching and phototoxicity, the Olympus' DSU disk scanning confocal system offers an alternative to Nipkow disk systems and less flexible laser scanning confocal systems.

About the author
Nicolas George is Product Manager, Research Microscopes at Olympus America Inc. For more information, visit the Olympus website at www.olympusamerica.com. The author can be contacted at (631) 844-5000 or by email at nicolas.george@olympus.com.Olympus America Inc.
Join the Discussion
Rate Article: Average 0 out of 5
register or log in to comment on this article!

0 Comments

Add Comment

Text Only 2000 character limit

Page 1 of 1

Research Exchange

Microplate Reader Test Plates Ensure Reliable Microplate Reader Operation

Aug 20

Use of a certified test plate can help to increase efficiency when calibrating microplate readers.

Automated Imaging Assisted Cell Line Development

Aug 19

Improve titer, quality and speed in cell line development.

New Frontiers: The Changing World of Biospecimen Collection and Management

Jul 30

The growth of biomarker research and personalized medicine requires more unified and large-scale software systems to track biological materials.

Optical Imaging in Stem Cell Research

Jun 1

Developing sensitive, non-invasive technologies to monitor engraftment in vivo is essential to accelerate the clinical implementation of cell therapies.

Step up to the MIQE

Mar 30

Over the years, polymerase chain reaction (PCR) has evolved into a readily automated, high throughput quantitative technology. Real-time quantitative PCR (qPCR) has become the industry standard for the detection and quantification of nucleic acids for multiple application, including quantification of RNA levels. But a lack of consensus among researchers on how to best perform and interpret qPCR experiments presents a major hurdle for advancement of the technology. This problem is exacerbated by insufficient experimental detail in published work, which impedes the ability of others to accurately evaluate or replicate reported results.

Fast Optimization of a Multiplex Influenza Identification Panel Using a Thermal Gradient

Mar 30

The year 2009 was marked by the emergence of a novel influenza A (H1N1) virus that infects humans. There is a need to identify the different strains of influenza virus for purposes of monitoring the H1N1 strain pandemic and for other epidemiological and scientific purposes.

Advantages of Monolithic Laser Combiner Technology in Confocal Microscopy Systems

Jan 6

Fluorescence microscopy techniques require a reliable light source at the desired wavelength or wavelengths, with minimal downtime for maintenance and alignment. Lasers are a popular light source, although the alignment and upkeep of laser combiners is a time-consuming prospect for many users.

Size-Exclusion Chromatography for Purification of Biomolecules

Dec 2 2009

Size-exclusion chromatography (SEC) is a popular method to separate biomolecules based on their size. Primarily, it is applied to the separation of biopolymers such as proteins and nucleic acids, i.e. water-soluble polymers.

Using the Tecan Genesis Workstation to Automate a Cytometric Bead Array (CBA) Immunoassay

Mar 11

The poster describe the process involved in automating a Cytometric Bead Array (CBA) immunoassay developed to measure relative concentrations of serum antibodies against Tetanus (TT), Sperm Whale Myoglobin (SWM) and Keyhole Limpet Hemocyanin (KLH) in KLH-immunized volunteers.

Ensuring Quality in Assays Performed with Automated Liquid Handlers

Feb 2

The focus of this presentation is to highlight the need of ensuring quality in important assays performed with automated liquid handlers. Nearly all assays performed within a laboratory are volume-dependent. In turn, all concentrations of biological and chemical components in these assays, as well as the associated dilution protocols, are volume-dependent. Because analyte concentration is volume-dependent, an assay’s results might be falsely interpreted if liquid handler variability and inaccuracies are unknown or if the system(s) go unchecked for a long period.

Inkjet System for Protein Crystallography

Feb 1

X-ray crystallography is used routinely by scientists to obtain the three dimensional structure of a biological molecule of interest.Such information can be used to determine how a pharmaceutical interacts with a protein target and what changes might improve functionality. However, the crystallization of macromolecules still remains a serious hindrance in structural determination despite impressive advances in screening methods and technologies.

Attention Deficit & Hyperactivity in a Drosophila Memory Mutant

Attention Deficit & Hyperactivity in a Drosophila Memory Mutant

Nov 9 2009

Action selection is modulated by external stimuli either directly or via memory retrieval. In a constantly changing environment, animals have evolved attention-like processes to effectively filter the incoming sensory stream. These attention-like processes, in turn, are modulated by memory. The neurobiological nature of how attention, action selection and memory are inter-connected is unknown. We describe here new phenotypes of the memory mutant radish in the fruit fly Drosophila.

A varying threshold method for ChIP peak-calling using multiple sources of information.

2 hours ago

MOTIVATION: Gene regulation commonly involves interaction among DNA, proteins and biochemical conditions. Using chromatin immunoprecipitation (ChIP) technologies, protein-DNA interactions are routinely detected in the genome scale. Computational methods that...

is-rSNP: a novel technique for in silico regulatory SNP detection.

2 hours ago

MOTIVATION: Determining the functional impact of non-coding disease-associated single nucleotide polymorphisms (SNPs) identified by genome-wide association studies (GWAS) is challenging. Many of these SNPs are likely to be regulatory SNPs (rSNPs): variations...

Vorescore--fold recognition improved by rescoring of protein structure models.

2 hours ago

SUMMARY: The identification of good protein structure models and their appropriate ranking is a crucial problem in structure prediction and fold recognition. For many alignment methods, rescoring of alignment-induced models using structural information can...

Dynamic deterministic effects propagation networks: learning signalling pathways from longitudinal protein array data.

2 hours ago

MOTIVATION: Network modelling in systems biology has become an important tool to study molecular interactions in cancer research, because understanding the interplay of proteins is necessary for developing novel drugs and therapies. De novo reconstruction of...

Prokariotic Cell Collection in Denmark

Nov 6 2009

I would like to know about a prokariotic cell collection in Denmark. Is there a cell bank in this country? I need a Lactobacillus strain for a fermentation assay and this information about the bank is very helpful for me.

Request for Entries

Oct 16 2009

Ask the Experts is your chance to get the answers to questions on applications, materials, methods, processes, and technologies. Email you question to bst_web@advantagemedia.com, and the editors of Bioscience Technology will find an appropriate expert to answer it. Watch this space in the future to see the questions your colleagues are posting.

STAY INFORMED: SUBSCRIBE TO

Magazine and E-mail Newsletters

Loading...
E-mail:   

MULTIMEDIA

Video:

Viewing SureFocus Slides

Jun 11

A demonstration of SureFocus Microscope Slides in the review of AFB Smears. SureFocus Slides are a patent-pending breakthrough in tuberculosis detection, as their fluorescent staining circle remains visible during review, Fluorescence Microscopy.

Podcasts:

Allen Institute for Brain Research

Allen Institute for Brain Research

Oct 14 2009

Discussed in this interview are both the mouse brain project and the human cortex project with an emphasis on the importance of these projects to neuroscience research.

Information: